All data displayed in the browser can be downloaded in BED and FASTA format using the Tools ➝ Table Browser menu.
This tool was developed to help the A-ParaDDisE investigators to explore the data and to communicate the results obtained in the context of its Work-Package 3 (WP3): "Functional characterization and target validation", which intends, among other objectives, to obtain Gene Signatures of drug action on parasites. Specifically, in this website we will show the genome-wide mapping of RNA-Seq data obtained with S. mansoni parasites treated with the drugs tested in the project. At present, no public results from A-ParaDDisE WP3 are yet available, and the site shows the public data on S. mansoni gene expression and histone marks.
If you are a member of the A-ParaDDisE research project you can have early access to the WP3 data on the effect of tested drugs, previous to publication, by sending an e-mail requesting a personal login and password. Please, send e-mail to firstname.lastname@example.org.
Additional relevant public S. mansoni databasesPara-site: http://parasite.org.au/para-site/introduction/ SchistoDB: http://schistodb.net/schisto/ GeneDB-schistosoma: http://www.genedb.org/Homepage/Smansoni
EUROPEAN COMMISSION 7th Framework Programme for Research, Technological Development and Demonstration
"This project has received funding from the European Union’s Seventh Framework Programme for research, technological development and demonstration under grant agreement no. 602080”